STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM27089.1Coiled stalk of trimeric autotransporter adhesin. (380 aa)    
Predicted Functional Partners:
SEM27056.1
Coiled stalk of trimeric autotransporter adhesin.
 
    
0.823
SEM61017.1
Coiled stalk of trimeric autotransporter adhesin.
  
     0.709
SEM67822.1
Head domain of trimeric autotransporter adhesin.
 
     0.660
SEM24857.1
Head domain of trimeric autotransporter adhesin.
 
     0.610
SEM69017.1
Head domain of trimeric autotransporter adhesin.
 
     0.595
SEM13511.1
Autotransporter adhesin.
  
     0.583
SEM13395.1
Autotransporter adhesin.
  
     0.581
SEM10281.1
Hypothetical protein.
  
     0.550
SEM13348.1
Head domain of trimeric autotransporter adhesin.
  
     0.546
SEM66697.1
Coiled stalk of trimeric autotransporter adhesin.
  
     0.401
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.