Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM29473.1Nitroreductase. (221 aa)    
Predicted Functional Partners:
SEM29501.1
Hypothetical protein/3-hydroxy acid dehydrogenase / malonic semialdehyde reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.691
SEM29442.1
1-acyl-sn-glycerol-3-phosphate acyltransferases.
       0.536
SEM22339.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.515
SEL87788.1
Ribosomal protein S12 methylthiotransferase accessory factor.
  
  
 0.507
SEM56904.1
Biotin--[acetyl-CoA-carboxylase] ligase; BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.
  
    0.490
SEM29533.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
       0.453
SEM31697.1
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
  
    0.449
SEL91651.1
ABC-2 type transport system permease protein.
  
    0.443
SEM01013.1
ABC-2 type transport system permease protein.
  
    0.443
SEM42629.1
ABC-2 type transport system permease protein.
  
    0.443
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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