STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM34039.1Bacteriophage Lambda NinG protein. (210 aa)    
Predicted Functional Partners:
SEM34011.1
Hypothetical protein.
       0.776
SEM33976.1
Hypothetical protein.
       0.773
SEM30006.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
  
     0.710
matP
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.700
SEM54576.1
Maltose operon protein.
  
     0.660
SEM61531.1
Cell division protein FtsN.
  
     0.638
SEM34150.1
Phage N-6-adenine-methyltransferase.
 
     0.635
SEM51326.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.605
SEM68119.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.605
SEM68255.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.595
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.