Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SEM34039.1Bacteriophage Lambda NinG protein. (210 aa)    
Predicted Functional Partners:
SEM34011.1
Hypothetical protein.
       0.775
SEM33976.1
Hypothetical protein.
       0.773
SEM30006.1
Chaperone TorD involved in molybdoenzyme TorA maturation.
  
     0.710
matP
Hypothetical protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.
  
     0.700
SEM54576.1
Maltose operon protein.
  
     0.660
SEM61531.1
Cell division protein FtsN.
  
     0.638
SEM34150.1
Phage N-6-adenine-methyltransferase.
 
     0.632
SEM51326.1
Uncharacterized conserved protein YdgA, DUF945 family.
  
     0.605
SEM68119.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.605
SEM68255.1
Phage putative head morphogenesis protein, SPP1 gp7 family.
 
     0.596
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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