Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM35398.1Competence protein ComEC. (775 aa)    
Predicted Functional Partners:
SEL96375.1
comF family protein.
 
  
 0.854
SEL94947.1
DNA processing protein.
 
  
 0.824
SEM44759.1
Protein transport protein HofC.
  
  
 0.772
SEM44728.1
Leader peptidase HopD.
  
  
 0.767
SEM44794.1
Protein transport protein HofB.
 
  
 0.760
SEM07799.1
Prepilin peptidase dependent protein A.
  
  
 0.728
SEM16270.1
dCMP deaminase.
  
  
 0.719
SEM23593.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
  
 0.712
recX
Regulatory protein; Modulates RecA activity; Belongs to the RecX family.
 
   
 0.660
SEL95851.1
Competence protein ComEA.
 
  
 0.638
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.