Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM41126.1Nicotinate phosphoribosyltransferase; Belongs to the NAPRTase family. (372 aa)    
Predicted Functional Partners:
SEM20977.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
    
 0.959
deoD
Purine-nucleoside phosphorylase.
     
 0.906
SEM10750.1
ATP diphosphatase.
     
 0.905
nudC
NAD+ diphosphatase; Belongs to the Nudix hydrolase family. NudC subfamily.
    
 0.902
UshA
5'-nucleotidase / UDP-sugar diphosphatase; Belongs to the 5'-nucleotidase family.
    
  0.901
surE
5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
  0.900
nadE
NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
 
  
 0.891
SEM41097.1
Hypothetical protein.
       0.515
SEM05849.1
Hypothetical protein.
  
     0.492
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.