Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL94648.1 | SEM22741.1 | SAMN05444853_10212 | SAMN05444853_10919 | Hypothetical protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.645 |
SEL94648.1 | SEM42308.1 | SAMN05444853_10212 | SAMN05444853_11710 | Hypothetical protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.645 |
SEM22741.1 | SEL94648.1 | SAMN05444853_10919 | SAMN05444853_10212 | Hemoglobin/transferrin/lactoferrin receptor protein. | Hypothetical protein. | 0.645 |
SEM22741.1 | SEM42258.1 | SAMN05444853_10919 | SAMN05444853_1178 | Hemoglobin/transferrin/lactoferrin receptor protein. | Tetratricopeptide repeat-containing protein. | 0.502 |
SEM22741.1 | SEM42308.1 | SAMN05444853_10919 | SAMN05444853_11710 | Hemoglobin/transferrin/lactoferrin receptor protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.425 |
SEM22741.1 | SEM43054.1 | SAMN05444853_10919 | SAMN05444853_11739 | Hemoglobin/transferrin/lactoferrin receptor protein. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.749 |
SEM22741.1 | SEM50670.1 | SAMN05444853_10919 | SAMN05444853_1218 | Hemoglobin/transferrin/lactoferrin receptor protein. | Protein of unknown function. | 0.520 |
SEM42258.1 | SEM22741.1 | SAMN05444853_1178 | SAMN05444853_10919 | Tetratricopeptide repeat-containing protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.502 |
SEM42258.1 | SEM42283.1 | SAMN05444853_1178 | SAMN05444853_1179 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.531 |
SEM42258.1 | SEM42308.1 | SAMN05444853_1178 | SAMN05444853_11710 | Tetratricopeptide repeat-containing protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.842 |
SEM42283.1 | SEM42258.1 | SAMN05444853_1179 | SAMN05444853_1178 | Hypothetical protein. | Tetratricopeptide repeat-containing protein. | 0.531 |
SEM42283.1 | SEM42308.1 | SAMN05444853_1179 | SAMN05444853_11710 | Hypothetical protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.487 |
SEM42308.1 | SEL94648.1 | SAMN05444853_11710 | SAMN05444853_10212 | Hemoglobin/transferrin/lactoferrin receptor protein. | Hypothetical protein. | 0.645 |
SEM42308.1 | SEM22741.1 | SAMN05444853_11710 | SAMN05444853_10919 | Hemoglobin/transferrin/lactoferrin receptor protein. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.425 |
SEM42308.1 | SEM42258.1 | SAMN05444853_11710 | SAMN05444853_1178 | Hemoglobin/transferrin/lactoferrin receptor protein. | Tetratricopeptide repeat-containing protein. | 0.842 |
SEM42308.1 | SEM42283.1 | SAMN05444853_11710 | SAMN05444853_1179 | Hemoglobin/transferrin/lactoferrin receptor protein. | Hypothetical protein. | 0.487 |
SEM42308.1 | SEM43054.1 | SAMN05444853_11710 | SAMN05444853_11739 | Hemoglobin/transferrin/lactoferrin receptor protein. | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.797 |
SEM42308.1 | SEM50670.1 | SAMN05444853_11710 | SAMN05444853_1218 | Hemoglobin/transferrin/lactoferrin receptor protein. | Protein of unknown function. | 0.403 |
SEM43054.1 | SEM22741.1 | SAMN05444853_11739 | SAMN05444853_10919 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.749 |
SEM43054.1 | SEM42308.1 | SAMN05444853_11739 | SAMN05444853_11710 | Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Hemoglobin/transferrin/lactoferrin receptor protein. | 0.797 |
page 1 of 2