Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SEM42629.1ABC-2 type transport system permease protein. (378 aa)    
Predicted Functional Partners:
SEM42657.1
ABC-2 type transport system ATP-binding protein.
  
 0.996
SEM42675.1
HlyD family secretion protein.
 
  
 0.955
SEL91621.1
ABC-2 type transport system ATP-binding protein.
 
  
 0.935
SEM17087.1
Lipopolysaccharide export system ATP-binding protein.
      0.851
SEM20052.1
Inositol transport system ATP-binding protein.
 
      0.748
potA
Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
      0.701
SEM42703.1
DNA-binding transcriptional regulator, AcrR family.
 
     0.697
SEM00951.1
HlyD family secretion protein.
 
  
 0.672
SEM01013.1
ABC-2 type transport system permease protein.
  
     0.665
SEM14082.1
lactose/L-arabinose transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
 0.613
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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