Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM02230.1 | SEM10236.1 | SAMN05444853_10379 | SAMN05444853_10529 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Aspartate aminotransferase. | 0.917 |
SEM02230.1 | SEM14244.1 | SAMN05444853_10379 | SAMN05444853_10642 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Aminopeptidase N. | 0.841 |
SEM02230.1 | SEM15031.1 | SAMN05444853_10379 | SAMN05444853_10674 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Cystathionine beta-lyase. | 0.986 |
SEM02230.1 | SEM42946.1 | SAMN05444853_10379 | SAMN05444853_11735 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | 0.818 |
SEM02230.1 | SEM54311.1 | SAMN05444853_10379 | SAMN05444853_12315 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Dipeptidase D. | 0.804 |
SEM02230.1 | pepA | SAMN05444853_10379 | SAMN05444853_10138 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.818 |
SEM10236.1 | SEM02230.1 | SAMN05444853_10529 | SAMN05444853_10379 | Aspartate aminotransferase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.917 |
SEM10236.1 | SEM14244.1 | SAMN05444853_10529 | SAMN05444853_10642 | Aspartate aminotransferase. | Aminopeptidase N. | 0.859 |
SEM10236.1 | SEM15031.1 | SAMN05444853_10529 | SAMN05444853_10674 | Aspartate aminotransferase. | Cystathionine beta-lyase. | 0.925 |
SEM10236.1 | SEM42946.1 | SAMN05444853_10529 | SAMN05444853_11735 | Aspartate aminotransferase. | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | 0.824 |
SEM10236.1 | SEM54311.1 | SAMN05444853_10529 | SAMN05444853_12315 | Aspartate aminotransferase. | Dipeptidase D. | 0.802 |
SEM10236.1 | pepA | SAMN05444853_10529 | SAMN05444853_10138 | Aspartate aminotransferase. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.824 |
SEM14244.1 | SEM02230.1 | SAMN05444853_10642 | SAMN05444853_10379 | Aminopeptidase N. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.841 |
SEM14244.1 | SEM10236.1 | SAMN05444853_10642 | SAMN05444853_10529 | Aminopeptidase N. | Aspartate aminotransferase. | 0.859 |
SEM14244.1 | SEM15031.1 | SAMN05444853_10642 | SAMN05444853_10674 | Aminopeptidase N. | Cystathionine beta-lyase. | 0.816 |
SEM14244.1 | SEM42946.1 | SAMN05444853_10642 | SAMN05444853_11735 | Aminopeptidase N. | PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation. | 0.918 |
SEM14244.1 | SEM54311.1 | SAMN05444853_10642 | SAMN05444853_12315 | Aminopeptidase N. | Dipeptidase D. | 0.925 |
SEM14244.1 | glyA | SAMN05444853_10642 | SAMN05444853_1381 | Aminopeptidase N. | Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.844 |
SEM14244.1 | pepA | SAMN05444853_10642 | SAMN05444853_10138 | Aminopeptidase N. | Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. | 0.918 |
SEM15031.1 | SEM02230.1 | SAMN05444853_10674 | SAMN05444853_10379 | Cystathionine beta-lyase. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.986 |
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