Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM03045.1 | SEM46067.1 | SAMN05444853_103118 | SAMN05444853_11914 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 4-amino-4-deoxychorismate lyase. | 0.919 |
SEM03045.1 | SEM46102.1 | SAMN05444853_103118 | SAMN05444853_11915 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | Para-aminobenzoate synthetase component 1. | 0.629 |
SEM03045.1 | SEM46161.1 | SAMN05444853_103118 | SAMN05444853_11917 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | Para-aminobenzoate synthetase component 2. | 0.652 |
SEM03045.1 | menF | SAMN05444853_103118 | SAMN05444853_11832 | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.437 |
SEM08013.1 | SEM29944.1 | SAMN05444853_104112 | SAMN05444853_11176 | Chorismate mutase. | Chorismate mutase. | 0.989 |
SEM08013.1 | SEM46067.1 | SAMN05444853_104112 | SAMN05444853_11914 | Chorismate mutase. | 4-amino-4-deoxychorismate lyase. | 0.467 |
SEM08013.1 | SEM46102.1 | SAMN05444853_104112 | SAMN05444853_11915 | Chorismate mutase. | Para-aminobenzoate synthetase component 1. | 0.913 |
SEM08013.1 | SEM46161.1 | SAMN05444853_104112 | SAMN05444853_11917 | Chorismate mutase. | Para-aminobenzoate synthetase component 2. | 0.914 |
SEM08013.1 | aroB | SAMN05444853_104112 | SAMN05444853_11237 | Chorismate mutase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.666 |
SEM08013.1 | aroC | SAMN05444853_104112 | SAMN05444853_11344 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.982 |
SEM08013.1 | aroE | SAMN05444853_104112 | SAMN05444853_1198 | Chorismate mutase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.641 |
SEM08013.1 | menF | SAMN05444853_104112 | SAMN05444853_11832 | Chorismate mutase. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.925 |
SEM29944.1 | SEM08013.1 | SAMN05444853_11176 | SAMN05444853_104112 | Chorismate mutase. | Chorismate mutase. | 0.989 |
SEM29944.1 | SEM46067.1 | SAMN05444853_11176 | SAMN05444853_11914 | Chorismate mutase. | 4-amino-4-deoxychorismate lyase. | 0.406 |
SEM29944.1 | SEM46102.1 | SAMN05444853_11176 | SAMN05444853_11915 | Chorismate mutase. | Para-aminobenzoate synthetase component 1. | 0.893 |
SEM29944.1 | SEM46161.1 | SAMN05444853_11176 | SAMN05444853_11917 | Chorismate mutase. | Para-aminobenzoate synthetase component 2. | 0.892 |
SEM29944.1 | aroB | SAMN05444853_11176 | SAMN05444853_11237 | Chorismate mutase. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.877 |
SEM29944.1 | aroC | SAMN05444853_11176 | SAMN05444853_11344 | Chorismate mutase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.995 |
SEM29944.1 | aroE | SAMN05444853_11176 | SAMN05444853_1198 | Chorismate mutase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.586 |
SEM29944.1 | menF | SAMN05444853_11176 | SAMN05444853_11832 | Chorismate mutase. | Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate. | 0.900 |
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