Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM51641.1Methyl-galactoside transport system substrate-binding protein. (332 aa)    
Predicted Functional Partners:
SEM51589.1
Methyl-galactoside transport system permease protein.
 
 
 0.981
SEM51616.1
Methyl-galactoside transport system ATP-binding protein.
 
 0.979
SEM20151.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
  
 
 0.936
menF
Menaquinone-specific isochorismate synthase; Catalyzes the conversion of chorismate to isochorismate.
      
 0.618
SEM01483.1
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.585
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.560
SEM01457.1
AI-2 transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.554
SEM20078.1
Inositol transport system permease protein.
 
 
 0.552
SEM26577.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.520
SEL97039.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.518
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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