Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM51668.1LacI family transcriptional regulator. (334 aa)    
Predicted Functional Partners:
SEM22339.1
Glutamate synthase (NADPH/NADH) large chain.
    
 
 0.736
SEM26729.1
PTS hybrid protein.
   
 
 0.730
SEM51696.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
  
  
 0.562
SEM20151.1
Two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB.
  
 
 
 0.542
SEM23902.1
LacI family transcriptional regulator.
  
     0.498
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.491
SEM51641.1
Methyl-galactoside transport system substrate-binding protein.
  
  
 0.475
SEM51756.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
 0.438
SEM51616.1
Methyl-galactoside transport system ATP-binding protein.
  
  
 0.403
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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