STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM54207.1PTS system, arbutin-like IIC component. (522 aa)    
Predicted Functional Partners:
SEM01873.1
PTS system, glucose-specific IIA component.
 0.999
SEL91222.1
N-acetylglucosamine kinase.
  
 
 0.953
SEM07048.1
Fructokinase.
  
 
 0.953
SEM60613.1
N-acylmannosamine kinase.
  
 
 0.953
SEM54176.1
6-phospho-beta-glucosidase.
 
  
 0.907
SEM36535.1
PTS system, N-acetylglucosamine-specific IIC component.
 
  
 0.825
SEM06116.1
Lichenan operon transcriptional antiterminator.
 
 
 0.712
SEM26729.1
PTS hybrid protein.
  
  
 0.640
SEM01896.1
Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).
  
 0.632
SEM54611.1
Alpha-amylase.
  
  
 0.585
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.