Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM55740.1phospholipid/cholesterol/gamma-HCH transport system permease protein. (258 aa)    
Predicted Functional Partners:
SEM55766.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.999
SEM55710.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
 
 0.998
SEM55662.1
Phospholipid transport system transporter-binding protein.
  
 0.981
SEM55685.1
Phospholipid transport system substrate-binding protein.
 
 
 0.974
SEM30986.1
Phospholipid-binding lipoprotein MlaA.
 
   
 0.648
SEM55634.1
Acid stress-induced BolA-like protein IbaG/YrbA, predicted regulator of iron metabolism; Belongs to the BolA/IbaG family.
       0.638
SEM55791.1
Glyoxylase, beta-lactamase superfamily II.
       0.615
SEM55820.1
Uncharacterized conserved protein YcbK, DUF882 family.
       0.599
SEM17087.1
Lipopolysaccharide export system ATP-binding protein.
 
  
  0.549
SEM55576.1
Dipeptide transport system substrate-binding protein.
    
  0.511
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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