Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM54113.1 | SEM56098.1 | SAMN05444853_1239 | SAMN05444853_12425 | Membrane protein TerC, possibly involved in tellurium resistance. | Hemolysin, contains CBS domains. | 0.536 |
SEM56098.1 | SEM54113.1 | SAMN05444853_12425 | SAMN05444853_1239 | Hemolysin, contains CBS domains. | Membrane protein TerC, possibly involved in tellurium resistance. | 0.536 |
SEM56098.1 | guaA | SAMN05444853_12425 | SAMN05444853_101127 | Hemolysin, contains CBS domains. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.489 |
SEM56098.1 | lysS | SAMN05444853_12425 | SAMN05444853_12426 | Hemolysin, contains CBS domains. | lysyl-tRNA synthetase, class 2; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.467 |
SEM56098.1 | ybeY | SAMN05444853_12425 | SAMN05444853_1273 | Hemolysin, contains CBS domains. | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.400 |
guaA | SEM56098.1 | SAMN05444853_101127 | SAMN05444853_12425 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Hemolysin, contains CBS domains. | 0.489 |
guaA | lysS | SAMN05444853_101127 | SAMN05444853_12426 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | lysyl-tRNA synthetase, class 2; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.950 |
lysS | SEM56098.1 | SAMN05444853_12426 | SAMN05444853_12425 | lysyl-tRNA synthetase, class 2; Belongs to the class-II aminoacyl-tRNA synthetase family. | Hemolysin, contains CBS domains. | 0.467 |
lysS | guaA | SAMN05444853_12426 | SAMN05444853_101127 | lysyl-tRNA synthetase, class 2; Belongs to the class-II aminoacyl-tRNA synthetase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.950 |
ybeY | SEM56098.1 | SAMN05444853_1273 | SAMN05444853_12425 | Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | Hemolysin, contains CBS domains. | 0.400 |