SEM61845.1 protein (Pasteurella skyensis) - STRING interaction network

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Score

SEM61845.1

Late embryogenesis abundant protein. (220 aa)

Predicted Functional Partners:

rpsJ

0.936

rplR

0.934

rpsB

0.931

rplX

0.926

rpsS

0.922

rpsC

0.922

rpsQ

0.922

rpsN

0.922

rpsH

0.922

rpsE

0.922

Your Current Organism:

Pasteurella skyensis

NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SEM61845.1	rplR	SAMN05444853_13014	SAMN05444853_102136	Late embryogenesis abundant protein.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.934
SEM61845.1	rplX	SAMN05444853_13014	SAMN05444853_102131	Late embryogenesis abundant protein.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.926
SEM61845.1	rpsB	SAMN05444853_13014	SAMN05444853_101108	Late embryogenesis abundant protein.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.931
SEM61845.1	rpsC	SAMN05444853_13014	SAMN05444853_102126	Late embryogenesis abundant protein.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.922
SEM61845.1	rpsE	SAMN05444853_13014	SAMN05444853_102137	Late embryogenesis abundant protein.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.922
SEM61845.1	rpsH	SAMN05444853_13014	SAMN05444853_102134	Late embryogenesis abundant protein.	SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.922
SEM61845.1	rpsJ	SAMN05444853_13014	SAMN05444853_102119	Late embryogenesis abundant protein.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.936
SEM61845.1	rpsN	SAMN05444853_13014	SAMN05444853_102133	Late embryogenesis abundant protein.	Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.922
SEM61845.1	rpsQ	SAMN05444853_13014	SAMN05444853_102129	Late embryogenesis abundant protein.	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.922
SEM61845.1	rpsS	SAMN05444853_13014	SAMN05444853_102124	Late embryogenesis abundant protein.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.922
rplR	SEM61845.1	SAMN05444853_102136	SAMN05444853_13014	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Late embryogenesis abundant protein.	0.934
rplR	rplX	SAMN05444853_102136	SAMN05444853_102131	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplR	rpsB	SAMN05444853_102136	SAMN05444853_101108	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.996
rplR	rpsC	SAMN05444853_102136	SAMN05444853_102126	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplR	rpsE	SAMN05444853_102136	SAMN05444853_102137	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.999
rplR	rpsH	SAMN05444853_102136	SAMN05444853_102134	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
rplR	rpsJ	SAMN05444853_102136	SAMN05444853_102119	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.998
rplR	rpsN	SAMN05444853_102136	SAMN05444853_102133	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.	0.999
rplR	rpsQ	SAMN05444853_102136	SAMN05444853_102129	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.998
rplR	rpsS	SAMN05444853_102136	SAMN05444853_102124	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.	0.998