Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM63403.1HeH/LEM domain-containing protein. (110 aa)    
Predicted Functional Partners:
SEM63436.1
Hypothetical protein.
       0.773
SEM63461.1
Hypothetical protein.
       0.773
SEM63484.1
Bacteriophage HK97-gp10, putative tail-component.
       0.773
SEM63507.1
Bacteriophage related protein of unknown function.
       0.773
SEM63385.1
Hypothetical protein.
       0.757
SEM63526.1
Hypothetical protein.
       0.746
SEM63548.1
Hypothetical protein.
       0.736
SEM63358.1
Hypothetical protein.
       0.716
SEM63573.1
Hypothetical protein.
       0.422
SEM63589.1
Phage-related protein.
       0.422
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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