Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM64321.1Phage-related protein, tail component. (1420 aa)    
Predicted Functional Partners:
SEM63690.1
Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif.
 
   
 0.799
SEM63709.1
Phage-related protein, tail component.
 
    0.778
SEM63669.1
Lambda-like phage minor tail protein L.
 
     0.776
SEM63589.1
Phage-related protein.
  
     0.774
SEM64269.1
Protein of unknown function.
       0.764
SEM64295.1
Hypothetical protein.
       0.762
SEM64203.1
Hypothetical protein.
       0.736
SEM64224.1
Hypothetical protein.
       0.736
SEM64247.1
Hypothetical protein.
       0.736
SEM65565.1
Protein of unknown function.
 
 
 
 0.593
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.