Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SEM64938.1C4-dicarboxylate transporter, DcuC family. (459 aa)    
Predicted Functional Partners:
SEM64910.1
Dipeptidase E; Belongs to the peptidase S51 family.
       0.779
SEM45972.1
Hypothetical protein.
  
     0.540
frdC
Fumarate reductase subunit C; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.
  
    0.529
SEM14474.1
Uncharacterized membrane protein YjjP, DUF1212 family.
  
     0.525
potE
Putrescine:ornithine antiporter; Catalyzes both the uptake and excretion of putrescine. The uptake of putrescine is dependent on the membrane potential and the excretion involves putrescine-ornithine antiporter activity. Belongs to the amino acid-polyamine-organocation (APC) superfamily. Basic amino acid/polyamine antiporter (APA) (TC 2.A.3.2) family.
  
     0.511
SEM14451.1
Uncharacterized membrane protein YjjB, DUF3815 family.
  
     0.489
SEL89383.1
4-oxalocrotonate tautomerase.
  
     0.461
SEM64960.1
ABC-type nickel/cobalt efflux system, permease component RcnA; Belongs to the NiCoT transporter (TC 2.A.52) family.
       0.457
SEM64986.1
ABC-type uncharacterized transport system, substrate-binding protein.
       0.457
SEM15007.1
Serine transporter.
  
     0.453
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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