Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEM65451.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SEM65475.1
Phage protein, HK97 gp10 family.
       0.773
SEM65503.1
Hypothetical protein.
       0.773
SEM65536.1
Hypothetical protein.
       0.773
SEM65565.1
Protein of unknown function.
       0.773
SEM65613.1
Hypothetical protein.
       0.757
SEM65590.1
Protein of unknown function.
       0.757
SEM65425.1
HeH/LEM domain-containing protein.
       0.536
SEM65408.1
Uncharacterized conserved protein YjdB, contains Ig-like domain.
       0.529
SEM65384.1
Hypothetical protein.
       0.504
SEM65636.1
Tape measure domain-containing protein.
       0.436
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.