STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM65565.1Protein of unknown function. (438 aa)    
Predicted Functional Partners:
SEM65475.1
Phage protein, HK97 gp10 family.
 
     0.868
SEM37633.1
Hypothetical protein.
 
 
   0.850
SEM37724.1
Hypothetical protein.
 
     0.793
SEM65536.1
Hypothetical protein.
       0.785
SEM37701.1
Hypothetical protein.
 
     0.777
SEM65451.1
Hypothetical protein.
       0.773
SEM65503.1
Hypothetical protein.
       0.773
SEM65590.1
Protein of unknown function.
       0.769
SEM65613.1
Hypothetical protein.
       0.761
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.556
Your Current Organism:
Pasteurella skyensis
NCBI taxonomy Id: 97481
Other names: DSM 24204, NCIMB 13593, NCTC 13204, P. skyensis, Pasteurella skyensis Birkbeck et al. 2002, strain 95A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.