NAPG protein (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

NAPG

Gamma-soluble NSF attachment protein isoform X1. (318 aa)

Predicted Functional Partners:

NSF

0.884

NAPB

0.855

VAMP4

0.853

NAPA

0.831

NBAS

0.816

VTI1A

0.807

FIGNL1

0.783

STX8

0.774

STX16

0.757

GOSR1

0.752

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FIGNL1	GOSR1	A0A2Y9PTM8	A0A2Y9PWI9	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.403
FIGNL1	NAPA	A0A2Y9PTM8	A0A2Y9P479	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	Alpha-soluble NSF attachment protein isoform X1.	0.551
FIGNL1	NAPB	A0A2Y9PTM8	A0A2Y9Q2Z2	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	Beta-soluble NSF attachment protein isoform X1.	0.551
FIGNL1	NAPG	A0A2Y9PTM8	A0A2Y9LBC3	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	Gamma-soluble NSF attachment protein isoform X1.	0.783
FIGNL1	STX16	A0A2Y9PTM8	A0A2Y9Q640	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	Syntaxin-16 isoform X1; Belongs to the syntaxin family.	0.439
GOSR1	FIGNL1	A0A2Y9PWI9	A0A2Y9PTM8	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	0.403
GOSR1	NAPA	A0A2Y9PWI9	A0A2Y9P479	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Alpha-soluble NSF attachment protein isoform X1.	0.801
GOSR1	NAPB	A0A2Y9PWI9	A0A2Y9Q2Z2	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Beta-soluble NSF attachment protein isoform X1.	0.801
GOSR1	NAPG	A0A2Y9PWI9	A0A2Y9LBC3	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Gamma-soluble NSF attachment protein isoform X1.	0.752
GOSR1	NBAS	A0A2Y9PWI9	A0A2Y9LJQ4	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Neuroblastoma-amplified sequence isoform X1.	0.489
GOSR1	NSF	A0A2Y9PWI9	A0A2Y9PHH3	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Vesicle-fusing ATPase isoform X1.	0.721
GOSR1	STX16	A0A2Y9PWI9	A0A2Y9Q640	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin-16 isoform X1; Belongs to the syntaxin family.	0.774
GOSR1	STX8	A0A2Y9PWI9	A0A2Y9PYL8	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Syntaxin-8 isoform X1.	0.788
GOSR1	VAMP4	A0A2Y9PWI9	A0A2Y9M187	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Vesicle-associated membrane protein 4 isoform X1.	0.792
GOSR1	VTI1A	A0A2Y9PWI9	A0A2Y9MU63	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.	0.554
NAPA	FIGNL1	A0A2Y9P479	A0A2Y9PTM8	Alpha-soluble NSF attachment protein isoform X1.	Fidgetin-like protein 1; Belongs to the AAA ATPase family.	0.551
NAPA	GOSR1	A0A2Y9P479	A0A2Y9PWI9	Alpha-soluble NSF attachment protein isoform X1.	Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.	0.801
NAPA	NAPB	A0A2Y9P479	A0A2Y9Q2Z2	Alpha-soluble NSF attachment protein isoform X1.	Beta-soluble NSF attachment protein isoform X1.	0.504
NAPA	NAPG	A0A2Y9P479	A0A2Y9LBC3	Alpha-soluble NSF attachment protein isoform X1.	Gamma-soluble NSF attachment protein isoform X1.	0.831
NAPA	NBAS	A0A2Y9P479	A0A2Y9LJQ4	Alpha-soluble NSF attachment protein isoform X1.	Neuroblastoma-amplified sequence isoform X1.	0.597