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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALKBH2DNA oxidative demethylase ALKBH2. (260 aa)    
Predicted Functional Partners:
PARS2
Probable proline--tRNA ligase, mitochondrial.
      
 0.778
ALKBH1
Nucleic acid dioxygenase ALKBH1.
      
 0.766
IARS2
isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.763
RPL8
60S ribosomal protein L8.
   
 
 0.718
YARS
Tyrosine--tRNA ligase.
  
  
 0.718
AARS2
alanine--tRNA ligase, mitochondrial; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.715
EPRS
Bifunctional glutamate/proline--tRNA ligase.
     
 0.703
ALKBH8
Alkylated DNA repair protein alkB homolog 8 isoform X1.
      
 0.702
CSNK2A1
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
      
 0.692
ALKBH4
LOW QUALITY PROTEIN: alpha-ketoglutarate-dependent dioxygenase alkB homolog 4.
      
 0.639
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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