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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB42Putative Ras-related protein Rab-42. (220 aa)    
Predicted Functional Partners:
ITSN2
Intersectin-2 isoform X1.
    
 0.827
ITSN1
Intersectin-1 isoform X1.
    
 0.726
LOC111178618
Collagen alpha-1(I) chain-like.
   
 0.674
CHM
Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane.
    
 0.651
KLHDC8A
Kelch domain-containing protein 8A isoform X1.
      
 0.610
TMEM71
Transmembrane protein 71 isoform X1.
      
 0.600
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.588
COG8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
    
 0.576
CCDC18
Coiled-coil domain-containing protein 18 isoform X1.
    
 0.550
MYO9B
Unconventional myosin-IXb isoform X1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.537
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.