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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111162922S-adenosylmethionine decarboxylase proenzyme-like. (164 aa)    
Predicted Functional Partners:
SRM
Spermidine synthase isoform X1; Belongs to the spermidine/spermine synthase family.
    
 0.840
SMS
Spermine synthase.
    
 0.839
MMS22L
Protein MMS22-like.
      
 0.602
GJA10
Gap junction protein; One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell.
      
 0.602
ODC1
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 
 0.540
LOC111164713
LOW QUALITY PROTEIN: ornithine decarboxylase-like; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 
 0.540
DTD2
Probable D-tyrosyl-tRNA(Tyr) deacylase 2 isoform X1.
      
 0.514
PAOX
Peroxisomal N(1)-acetyl-spermine/spermidine oxidase isoform X1.
      
 0.514
SMOX
Spermine oxidase isoform X2.
      
 0.514
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.512
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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