LDLRAD4 protein (Delphinapterus leucas) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

LDLRAD4

LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4. (322 aa)

Predicted Functional Partners:

RPS2

0.709

ISM1

0.702

CIB1

0.692

TSR1

0.635

LOC111168531

0.619

LOC111168536

0.619

CFI

0.616

BYSL

0.614

MC2R

0.609

KANK4

0.592

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BYSL	LDLRAD4	A0A2Y9P5Z7	A0A2Y9LEF9	Bystin.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.614
BYSL	RPS2	A0A2Y9P5Z7	A0A2Y9PTJ6	Bystin.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.991
BYSL	TSR1	A0A2Y9P5Z7	A0A2Y9Q1J8	Bystin.	pre-rRNA-processing protein TSR1 homolog isoform X1.	0.998
CFI	LDLRAD4	A0A2Y9MKT1	A0A2Y9LEF9	Complement factor I; Belongs to the peptidase S1 family.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.616
CIB1	LDLRAD4	A0A2Y9MKZ4	A0A2Y9LEF9	Calcium and integrin-binding protein 1.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.692
ISM1	LDLRAD4	A0A2Y9Q395	A0A2Y9LEF9	Isthmin-1 isoform X1.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.702
ISM1	TSR1	A0A2Y9Q395	A0A2Y9Q1J8	Isthmin-1 isoform X1.	pre-rRNA-processing protein TSR1 homolog isoform X1.	0.514
KANK4	LDLRAD4	A0A2Y9NSF0	A0A2Y9LEF9	KN motif and ankyrin repeat domain-containing protein 4.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.592
LDLRAD4	BYSL	A0A2Y9LEF9	A0A2Y9P5Z7	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Bystin.	0.614
LDLRAD4	CFI	A0A2Y9LEF9	A0A2Y9MKT1	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Complement factor I; Belongs to the peptidase S1 family.	0.616
LDLRAD4	CIB1	A0A2Y9LEF9	A0A2Y9MKZ4	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Calcium and integrin-binding protein 1.	0.692
LDLRAD4	ISM1	A0A2Y9LEF9	A0A2Y9Q395	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Isthmin-1 isoform X1.	0.702
LDLRAD4	KANK4	A0A2Y9LEF9	A0A2Y9NSF0	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	KN motif and ankyrin repeat domain-containing protein 4.	0.592
LDLRAD4	LOC111168531	A0A2Y9LEF9	A0A2Y9MG41	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.619
LDLRAD4	LOC111168536	A0A2Y9LEF9	A0A2Y9MLG6	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.619
LDLRAD4	MC2R	A0A2Y9LEF9	A0A2Y9LJ66	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	Adrenocorticotropic hormone receptor.	0.609
LDLRAD4	RPS2	A0A2Y9LEF9	A0A2Y9PTJ6	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.709
LDLRAD4	TSR1	A0A2Y9LEF9	A0A2Y9Q1J8	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	pre-rRNA-processing protein TSR1 homolog isoform X1.	0.635
LOC111168531	LDLRAD4	A0A2Y9MG41	A0A2Y9LEF9	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.619
LOC111168536	LDLRAD4	A0A2Y9MLG6	A0A2Y9LEF9	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	LOW QUALITY PROTEIN: low-density lipoprotein receptor class A domain-containing protein 4.	0.619