Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LUMLumican. (340 aa)    
Predicted Functional Partners:
COL1A2
Collagen alpha-2(I) chain.
   
 0.991
COL3A1
Collagen alpha-1(III) chain.
   
 0.952
FBN1
Fibrillin-1 isoform X1.
   
 0.949
DCN
Decorin; May affect the rate of fibrils formation.
  
  
0.937
SPARC
SPARC.
   
 
 0.936
TGFB2
Transforming growth factor beta; Belongs to the TGF-beta family.
    
 0.932
MMP2
72 kDa type IV collagenase.
   
 0.919
COL1A1
Collagen alpha-1(I) chain.
   
 0.915
FASLG
Tumor necrosis factor ligand superfamily member 6; Belongs to the tumor necrosis factor family.
    
  0.902
MDM2
E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family.
     
  0.901
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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