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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD6IPProgrammed cell death 6-interacting protein isoform X1. (875 aa)    
Predicted Functional Partners:
CHMP4C
Charged multivesicular body protein 4c.
   
 0.982
CHMP4B
Charged multivesicular body protein 4b.
   
 0.982
CHMP4A
Charged multivesicular body protein 4a.
    
 0.969
MVB12A
Multivesicular body subunit 12A.
     
 0.947
MVB12B
Multivesicular body subunit 12B isoform X1.
     
 0.929
TSG101
Tumor susceptibility gene 101 protein isoform X1.
   
 0.927
SDCBP
Syntenin-1 isoform X3.
    
 0.891
LOC111186089
LOW QUALITY PROTEIN: syntenin-1-like.
    
 0.891
PDCD6
Programmed cell death protein 6 isoform X1.
    
 
 0.809
VPS4B
Vacuolar protein sorting-associated protein 4B; Belongs to the AAA ATPase family.
   
 0.788
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.