TBC1D32 protein (Delphinapterus leucas) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TBC1D32

Protein broad-minded isoform X1. (1300 aa)

Predicted Functional Partners:

SCLT1

0.730

CFAP20

0.713

OFD1

0.614

MPP7

0.613

PHF12

0.613

ZBTB14

0.605

ATE1

0.605

SEZ6

0.604

QRICH1

0.597

ROR1

0.568

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATE1	MPP7	A0A2Y9MTK0	A0A2Y9NZ90	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	0.523
ATE1	PHF12	A0A2Y9MTK0	A0A2Y9Q8S7	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	PHD finger protein 12.	0.610
ATE1	ROR1	A0A2Y9MTK0	A0A2Y9NSC8	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	Inactive tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.	0.515
ATE1	SEZ6	A0A2Y9MTK0	A0A2Y9Q8N2	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	Seizure protein 6 homolog isoform X1.	0.522
ATE1	TBC1D32	A0A2Y9MTK0	A0A2Y9LRB1	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	Protein broad-minded isoform X1.	0.605
CFAP20	TBC1D32	A0A2Y9LQI9	A0A2Y9LRB1	Cilia- and flagella-associated protein 20.	Protein broad-minded isoform X1.	0.713
MPP7	ATE1	A0A2Y9NZ90	A0A2Y9MTK0	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	0.523
MPP7	PHF12	A0A2Y9NZ90	A0A2Y9Q8S7	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	PHD finger protein 12.	0.613
MPP7	ROR1	A0A2Y9NZ90	A0A2Y9NSC8	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	Inactive tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.	0.546
MPP7	SEZ6	A0A2Y9NZ90	A0A2Y9Q8N2	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	Seizure protein 6 homolog isoform X1.	0.565
MPP7	TBC1D32	A0A2Y9NZ90	A0A2Y9LRB1	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	Protein broad-minded isoform X1.	0.613
OFD1	SCLT1	A0A2Y9MI58	A0A2Y9LSF7	Oral-facial-digital syndrome 1 protein isoform X1.	Sodium channel and clathrin linker 1 isoform X1.	0.752
OFD1	TBC1D32	A0A2Y9MI58	A0A2Y9LRB1	Oral-facial-digital syndrome 1 protein isoform X1.	Protein broad-minded isoform X1.	0.614
PHF12	ATE1	A0A2Y9Q8S7	A0A2Y9MTK0	PHD finger protein 12.	Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family.	0.610
PHF12	MPP7	A0A2Y9Q8S7	A0A2Y9NZ90	PHD finger protein 12.	MAGUK p55 subfamily member 7 isoform X1; Belongs to the MAGUK family.	0.613
PHF12	ROR1	A0A2Y9Q8S7	A0A2Y9NSC8	PHD finger protein 12.	Inactive tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. ROR subfamily.	0.611
PHF12	SEZ6	A0A2Y9Q8S7	A0A2Y9Q8N2	PHD finger protein 12.	Seizure protein 6 homolog isoform X1.	0.614
PHF12	TBC1D32	A0A2Y9Q8S7	A0A2Y9LRB1	PHD finger protein 12.	Protein broad-minded isoform X1.	0.613
QRICH1	TBC1D32	A0A2Y9N795	A0A2Y9LRB1	Glutamine-rich protein 1.	Protein broad-minded isoform X1.	0.597
QRICH1	ZBTB14	A0A2Y9N795	A0A2Y9LE86	Glutamine-rich protein 1.	Zinc finger and BTB domain-containing protein 14.	0.515