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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX1LIM/homeobox protein Lhx1. (406 aa)    
Predicted Functional Partners:
CITED1
Cbp/p300-interacting transactivator 1 isoform X1.
    
 
 0.746
CCNK
cyclin-K; Belongs to the cyclin family.
    
   0.743
TLX3
T-cell leukemia homeobox protein 3.
    
 
 0.724
PAX8
Paired box protein Pax-8.
   
 
 0.712
WT1
Wilms tumor protein isoform X1.
   
 
 0.694
PAX2
Paired box protein Pax-2 isoform X1.
   
 
 0.660
EOMES
Eomesodermin homolog isoform X1.
    
 0.659
PAX5
Paired box protein Pax-5 isoform X2.
   
 
 0.653
SALL1
Sal-like protein 1.
    
 
 0.624
CCNT1
cyclin-T1; Belongs to the cyclin family.
    
   0.614
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.