Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO2Calcium-binding and coiled-coil domain-containing protein 2. (448 aa)    
Predicted Functional Partners:
SQSTM1
Sequestosome-1.
     
 0.917
MAP1LC3B
Microtubule-associated proteins 1A/1B light chain 3B.
     
 0.902
MAP1LC3A
Microtubule-associated proteins 1A/1B light chain 3A.
     
 0.902
FKBP8
Peptidylprolyl isomerase.
     
  0.900
WDFY3
WD repeat and FYVE domain-containing protein 3 isoform X1.
     
  0.900
MFN1
Mitofusin-1 isoform X1; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
  0.900
TBK1
Serine/threonine-protein kinase TBK1.
     
  0.900
GABARAPL1
Gamma-aminobutyric acid receptor-associated protein-like 1.
     
  0.900
OPTN
Optineurin isoform X1.
     
  0.900
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
     
  0.900
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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