Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC111166410Keratin, type I cytoskeletal 15; Belongs to the intermediate filament family. (443 aa)    
Predicted Functional Partners:
KRT4
Keratin, type II cytoskeletal 4; Belongs to the intermediate filament family.
   
 0.680
UNC79
Protein unc-79 homolog isoform X1.
   
 0.613
LOC111166411
Keratin, type I cytoskeletal 19; Belongs to the intermediate filament family.
   
  0.599
LRIG1
Leucine-rich repeats and immunoglobulin-like domains protein 1.
    
 0.558
KRT18
Keratin, type I cytoskeletal 18; Belongs to the intermediate filament family.
   
  0.555
LGR6
Leucine-rich repeat-containing G-protein coupled receptor 6.
     
 0.547
LOC111173970
Keratin, type II cytoskeletal 5-like; Belongs to the intermediate filament family.
   
 0.535
LOC111173971
Keratin, type II cytoskeletal 6A-like; Belongs to the intermediate filament family.
   
 0.529
KRT7
Keratin, type II cytoskeletal 7; Belongs to the intermediate filament family.
   
 0.524
KRT79
LOW QUALITY PROTEIN: keratin, type II cytoskeletal 79; Belongs to the intermediate filament family.
  
0.521
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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