Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SUGP1SURP and G-patch domain-containing protein 1 isoform X1. (635 aa)    
Predicted Functional Partners:
U2AF2
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 0.980
RBM10
RNA-binding protein 10 isoform X1.
   
 0.978
RBM17
Splicing factor 45.
   
 
 0.966
DHX15
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
    
 0.956
HTATSF1
HIV Tat-specific factor 1.
     
 0.935
CDC40
pre-mRNA-processing factor 17.
     
  0.927
DNAJC8
dnaJ homolog subfamily C member 8.
     
  0.927
TCERG1
LOW QUALITY PROTEIN: transcription elongation regulator 1.
   
 
  0.925
PPP1R8
Nuclear inhibitor of protein phosphatase 1.
     
  0.923
RBM6
RNA-binding protein 6 isoform X1.
   
 0.912
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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