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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LUC7L3Luc7-like protein 3 isoform X1. (517 aa)    
Predicted Functional Partners:
RBM25
RNA-binding protein 25 isoform X1.
   
 0.984
PNISR
Arginine/serine-rich protein PNISR isoform X1.
   
  
 0.907
PNN
Pinin.
   
 
 0.890
SRSF11
Serine/arginine-rich splicing factor 11 isoform X1.
   
 
 0.876
RBM39
RNA-binding protein 39 isoform X1.
   
 0.871
SF1
Splicing factor 1 isoform X1.
   
 0.853
SRRT
LOW QUALITY PROTEIN: serrate RNA effector molecule homolog.
   
 0.841
DDX5
Probable ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
   
 0.836
SRRM2
Serine/arginine repetitive matrix protein 2 isoform X1.
   
 0.815
SNRPD2
Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.
   
 0.812
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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