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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUL4Bcullin-4B isoform X1; Belongs to the cullin family. (904 aa)    
Predicted Functional Partners:
DDB1
DNA damage-binding protein 1.
   
 0.990
DCAF1
DDB1- and CUL4-associated factor 1 isoform X1.
   
 0.964
CUL4A
cullin-4A; Belongs to the cullin family.
  
  
0.960
LOC111175787
LOW QUALITY PROTEIN: cullin-4B-like; Belongs to the cullin family.
  
  
 
0.900
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.891
ERCC8
DNA excision repair protein ERCC-8 isoform X1.
    
 0.883
DDB2
DNA damage-binding protein 2 isoform X1.
    
 0.834
DTL
Denticleless protein homolog.
    
 0.827
DDA1
DET1- and DDB1-associated protein 1.
    
 0.818
DCAF11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
    
 0.810
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.