LSM7 protein (Delphinapterus leucas) - STRING interaction network

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Score

LSM7

U6 snRNA-associated Sm-like protein LSm7. (125 aa)

Predicted Functional Partners:

LSM4

0.999

LSM3

0.999

LSM2

0.999

LSM5

0.999

LSM6

0.999

LSM1

0.997

SNRPD3

0.987

DDX6

0.987

SNRPD2

0.985

PRPF4

0.983

Your Current Organism:

Delphinapterus leucas

NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX6	LSM1	A0A2Y9M6F6	A0A2Y9N684	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	0.988
DDX6	LSM2	A0A2Y9M6F6	A0A2Y9MI85	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.836
DDX6	LSM3	A0A2Y9M6F6	A0A2Y9M965	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.734
DDX6	LSM4	A0A2Y9M6F6	A0A2Y9LX77	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.884
DDX6	LSM5	A0A2Y9M6F6	A0A2Y9NX95	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.669
DDX6	LSM6	A0A2Y9M6F6	A0A2Y9QJ02	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm6.	0.734
DDX6	LSM7	A0A2Y9M6F6	A0A2Y9M7F3	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	U6 snRNA-associated Sm-like protein LSm7.	0.987
DDX6	SNRPD2	A0A2Y9M6F6	A0A2Y9PEK4	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.467
DDX6	SNRPD3	A0A2Y9M6F6	A0A2Y9LB64	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.486
LSM1	DDX6	A0A2Y9N684	A0A2Y9M6F6	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.988
LSM1	LSM2	A0A2Y9N684	A0A2Y9MI85	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.997
LSM1	LSM3	A0A2Y9N684	A0A2Y9M965	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.974
LSM1	LSM4	A0A2Y9N684	A0A2Y9LX77	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.994
LSM1	LSM5	A0A2Y9N684	A0A2Y9NX95	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.997
LSM1	LSM6	A0A2Y9N684	A0A2Y9QJ02	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm6.	0.997
LSM1	LSM7	A0A2Y9N684	A0A2Y9M7F3	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U6 snRNA-associated Sm-like protein LSm7.	0.997
LSM1	PRPF4	A0A2Y9N684	A0A2Y9NIA8	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	U4/U6 small nuclear ribonucleoprotein Prp4 isoform X2.	0.457
LSM1	SNRPD2	A0A2Y9N684	A0A2Y9PEK4	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome.	0.601
LSM1	SNRPD3	A0A2Y9N684	A0A2Y9LB64	U6 snRNA-associated Sm-like protein LSm1; Plays a role in the degradation of histone mRNAs, the only eukaryotic mRNAs that are not polyadenylated. Probably also part of an LSm subunits-containing complex involved in the general process of mRNA degradation.	Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.	0.481
LSM2	DDX6	A0A2Y9MI85	A0A2Y9M6F6	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Probable ATP-dependent RNA helicase DDX6; Belongs to the DEAD box helicase family.	0.836