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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYT4Synaptotagmin-4. (425 aa)    
Predicted Functional Partners:
VAMP2
Vesicle-associated membrane protein 2.
   
 0.682
STON2
Stonin-2 isoform X1; Belongs to the Stoned B family.
   
 0.674
SYT1
Synaptotagmin-1 isoform X1.
   
0.660
SYT2
Synaptotagmin-2 isoform X1.
   
0.660
VAMP3
Vesicle-associated membrane protein 3.
   
 0.639
ITSN2
Intersectin-2 isoform X1.
     
 0.613
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.608
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.608
RAB3A
Ras-related protein Rab-3A.
   
 0.599
VAMP1
Vesicle-associated membrane protein 1.
   
 0.576
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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