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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBFAPutative ribosome-binding factor A, mitochondrial. (389 aa)    
Predicted Functional Partners:
MTIF3
LOW QUALITY PROTEIN: translation initiation factor IF-3, mitochondrial.
   
 
 0.853
MRPS21
28S ribosomal protein S21, mitochondrial.
   
   0.781
METTL15
Probable methyltransferase-like protein 15 isoform X1.
    
 
 0.773
TFB1M
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 
 0.751
MRPS11
28S ribosomal protein S11, mitochondrial isoform X1; Belongs to the universal ribosomal protein uS11 family.
    
   0.749
MRPS7
28S ribosomal protein S7, mitochondrial.
    
   0.749
DAP3
28S ribosomal protein S29, mitochondrial isoform X1.
    
 
 0.676
MRPS26
28S ribosomal protein S26, mitochondrial isoform X1.
   
   0.668
MRPS34
28S ribosomal protein S34, mitochondrial.
   
 
 0.648
MRPS22
28S ribosomal protein S22, mitochondrial.
    
 
 0.643
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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