Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RNF130E3 ubiquitin-protein ligase RNF130 isoform X1. (510 aa)    
Predicted Functional Partners:
CGRRF1
Cell growth regulator with RING finger domain protein 1.
     
 0.580
RNF145
RING finger protein 145 isoform X1.
    
 
 0.571
RNF183
Probable E3 ubiquitin-protein ligase RNF183.
    
 0.564
RNF144A
RBR-type E3 ubiquitin transferase.
     
 0.560
TMEM129
E3 ubiquitin-protein ligase TM129 isoform X1.
      
 0.545
CPEB3
Cytoplasmic polyadenylation element-binding protein 3 isoform X1.
   
  
 0.512
OCIAD2
OCIA domain-containing protein 2.
      
 0.511
RNF170
E3 ubiquitin-protein ligase RNF170 isoform X1.
      
 0.504
RNF144B
RBR-type E3 ubiquitin transferase.
     
 0.500
FAM131B
Protein FAM131B isoform X1.
      
 0.485
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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