close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM38E3 ubiquitin-protein ligase TRIM38. (461 aa)    
Predicted Functional Partners:
ZCCHC3
Zinc finger CCHC domain-containing protein 3.
   
 0.714
TRIM14
LOW QUALITY PROTEIN: tripartite motif-containing protein 14.
   
0.663
TRIM56
E3 ubiquitin-protein ligase TRIM56.
   
 
 0.632
USP3
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.588
ZNF182
Zinc finger protein 182 isoform X1.
   
 0.526
DDX41
Probable ATP-dependent RNA helicase DDX41.
    
 0.520
IL5RA
Interleukin-5 receptor subunit alpha isoform X1.
   
  
 0.505
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
   
 0.496
RNF4
E3 ubiquitin-protein ligase RNF4 isoform X1.
    
 
 0.489
USP15
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
    
 
 0.486
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.