Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MESP1Mesoderm posterior protein 1. (265 aa)    
Predicted Functional Partners:
NKX2-5
Homeobox protein Nkx-2.5.
    
 0.702
GATA4
Transcription factor GATA-4 isoform X1.
   
 0.684
KIAA1024
UPF0258 protein KIAA1024 homolog.
      
 0.635
TCF3
Transcription factor E2-alpha isoform X1.
   
 0.633
SOX17
Transcription factor SOX-17.
    
 
 0.547
GATA5
Transcription factor GATA-5.
   
 0.522
AKAP13
A-kinase anchor protein 13 isoform X5.
      
 0.484
TCF4
Transcription factor 4 isoform X1.
   
 0.472
TCF12
Transcription factor 12 isoform X1.
   
 0.464
GATA6
Transcription factor GATA-6.
   
 0.446
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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