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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECM1Extracellular matrix protein 1 isoform X1. (544 aa)    
Predicted Functional Partners:
RNGTT
Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.
      
 0.517
TSPAN6
Tetraspanin.
      
 0.513
PIN4
Peptidyl-prolyl cis-trans isomerase.
      
 0.499
TIMP3
Metalloproteinase inhibitor 3.
     
 0.486
CLEC3B
Tetranectin.
     
 0.485
CLEC17A
C-type lectin domain family 17, member A isoform X1.
     
 0.479
MPIG6B
Megakaryocyte and platelet inhibitory receptor G6b isoform X1.
  
   
 0.458
ZBTB44
Zinc finger and BTB domain-containing protein 44 isoform X1.
    
 
 0.445
PCLAF
PCNA-associated factor.
      
 0.445
NID1
Nidogen-1 isoform X1.
      
 0.438
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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