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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAI2Retinoic acid-induced protein 2 isoform X1. (526 aa)    
Predicted Functional Partners:
LOC111177320
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.699
FAU
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.699
TRIM3
Tripartite motif-containing protein 3 isoform X1.
    
 0.626
LOC111177343
A-kinase anchor protein 2 isoform X1.
      
 0.606
LOC111169218
Tripartite motif-containing protein 6-like.
    
 0.539
TRIM41
E3 ubiquitin-protein ligase TRIM41 isoform X1.
    
 0.530
TRIM2
Tripartite motif-containing protein 2 isoform X1.
    
 0.530
CRYM
Ketimine reductase mu-crystallin.
   
  
 0.517
LOC111187540
E3 SUMO-protein ligase RanBP2-like.
   
 
 0.511
GLE1
Nucleoporin GLE1 isoform X1.
   
 0.467
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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