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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111171123LOW QUALITY PROTEIN: protocadherin beta-15-like. (586 aa)    
Predicted Functional Partners:
EMC1
ER membrane protein complex subunit 1 isoform X1.
      
 0.718
LRRC4B
Leucine-rich repeat-containing protein 4B.
     
 0.639
SYT3
Synaptotagmin-3.
   
 
 0.627
UBR4
E3 ubiquitin-protein ligase UBR4 isoform X1.
     
 0.616
RFX3
Transcription factor RFX3 isoform X2.
      
 0.610
SERINC2
Serine incorporator 2.
      
 0.608
CARS
cysteine--tRNA ligase, cytoplasmic isoform X1.
      
 0.504
CACNA1A
Voltage-dependent P/Q-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death. The isoform alpha-1A gives rise to P and/or Q- type calcium currents.
   
 
 0.458
LGALS12
Galectin.
     
 0.445
NAP1L4
Nucleosome assembly protein 1-like 4 isoform X1; Belongs to the nucleosome assembly protein (NAP) family.
   
  
 0.443
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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