STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3GAP1Rab3 GTPase-activating protein catalytic subunit isoform X1. (982 aa)    
Predicted Functional Partners:
RAB3GAP2
Rab3 GTPase-activating protein non-catalytic subunit isoform X1.
   
 0.999
RAB18
Ras-related protein Rab-18.
    
 0.844
ARHGEF10
Rho guanine nucleotide exchange factor 10 isoform X1.
      
 0.764
RAB36
Ras-related protein Rab-36 isoform X1.
     
 0.758
TBC1D20
TBC1 domain family member 20.
      
 0.742
TBC1D31
TBC1 domain family member 31 isoform X1.
   
 
 0.730
RABGGTA
Geranylgeranyl transferase type-2 subunit alpha isoform X1.
      
 0.717
RABL3
Rab-like protein 3.
      
 0.716
DMXL1
dmX-like protein 1 isoform X1.
   
 
 0.713
RAB39A
Ras-related protein Rab-39A isoform X1.
    
 
 0.689
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.