STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111179885Retinitis pigmentosa 9 protein-like isoform X1. (157 aa)    
Predicted Functional Partners:
RP9
Retinitis pigmentosa 9 protein isoform X1.
  
  
 
0.901
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase.
      
 0.609
PRPF8
pre-mRNA-processing-splicing factor 8.
    
 
 0.592
DHX38
pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform X1.
   
 
 0.581
FSCN2
Fascin.
      
 0.576
PRPF31
U4/U6 small nuclear ribonucleoprotein Prp31.
   
  
 0.541
CWC25
pre-mRNA-splicing factor CWC25 homolog isoform X1.
   
 
 0.540
PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1.
      
 0.509
SNW1
SNW domain-containing protein 1.
   
 
 0.509
GUCA1B
Guanylyl cyclase-activating protein 2.
      
 0.506
Your Current Organism:
Delphinapterus leucas
NCBI taxonomy Id: 9749
Other names: D. leucas, beluga, beluga whale, white whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.