STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYPD1ly6/PLAUR domain-containing protein 1. (141 aa)    
Predicted Functional Partners:
CALB1
Calbindin isoform X1.
   
  
 0.547
MGAT4C
Alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C.
   
  
 0.545
NTNG1
netrin-G1 isoform X2.
      
 0.529
DAPL1
Death-associated protein-like 1.
      
 0.526
DEFB124
Beta-defensin; Has antibacterial activity; Belongs to the beta-defensin family.
      
 0.514
VAT1L
Synaptic vesicle membrane protein VAT-1 homolog-like.
      
 0.512
CCDC102B
Coiled-coil domain-containing protein 102B.
      
 0.506
C20H1orf198
Uncharacterized protein C1orf198 homolog isoform X1.
      
 0.506
HMGCLL1
3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic.
      
 0.506
NDNF
Protein NDNF.
      
 0.485
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.