STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EPB41L4ABand 4.1-like protein 4A isoform X1. (686 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK isoform X2; Belongs to the MAGUK family.
   
 0.790
EML6
Echinoderm microtubule-associated protein-like 6 isoform X1.
      
 0.760
SLC6A7
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.700
FAM57B
Protein FAM57B.
      
 0.672
ARHGAP1
Rho GTPase-activating protein 1 isoform X2.
      
 0.625
DYNLL2
Dynein light chain.
      
 0.618
ITM2C
Integral membrane protein 2C.
      
 0.617
ARHGEF37
Rho guanine nucleotide exchange factor 37.
      
 0.617
FGD3
FYVE, RhoGEF and PH domain-containing protein 3.
      
 0.616
ALAD
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
      
 0.615
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.