STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAFA5Protein FAM19A5 isoform X1. (132 aa)    
Predicted Functional Partners:
WDR6
WD repeat-containing protein 6.
      
 0.535
RORB
Nuclear receptor ROR-beta.
      
 0.524
TMEM132D
Transmembrane protein 132D.
      
 0.493
DCLK1
Serine/threonine-protein kinase DCLK1 isoform X2.
      
 0.487
CITED1
Cbp/p300-interacting transactivator 1 isoform X1.
      
 0.436
RMDN2
Regulator of microtubule dynamics protein 2.
      
 0.424
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.