STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMMECR1LAMMECR1-like protein isoform X1. (310 aa)    
Predicted Functional Partners:
NOL7
LOW QUALITY PROTEIN: uncharacterized protein LOC102980820.
      
 0.577
EDC3
Enhancer of mRNA-decapping protein 3.
   
  
 0.558
MEMO1
Protein MEMO1 isoform X2.
  
    0.541
RBM45
RNA-binding protein 45 isoform X3.
   
  
 0.522
ZC3H14
Zinc finger CCCH domain-containing protein 14 isoform X1.
    
 
 0.521
FCF1
rRNA-processing protein FCF1 homolog isoform X1.
      
 0.520
ZZEF1
Zinc finger ZZ-type and EF-hand domain-containing protein 1.
   
  
 0.516
ZKSCAN5
Zinc finger protein with KRAB and SCAN domains 5 isoform X2.
      
 0.510
PRPF38A
pre-mRNA-splicing factor 38A.
      
 0.509
CNOT4
CCR4-NOT transcription complex subunit 4 isoform X1.
      
 0.508
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.