STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL5BADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family. (180 aa)    
Predicted Functional Partners:
ENSPCTP00005027245
Intersectin-2-like isoform X1.
    
 0.824
ITSN2
Intersectin-2 isoform X1.
    
 0.824
VPS52
Vacuolar protein sorting-associated protein 52 homolog.
    
 0.751
VPS54
Vacuolar protein sorting-associated protein 54 isoform X2.
    
 0.750
NSUN6
Putative methyltransferase NSUN6 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.712
ITSN1
Intersectin-1.
    
 0.707
RMND5B
E3 ubiquitin-protein transferase RMND5B isoform X1.
      
 0.692
KLHL15
Kelch-like protein 15.
   
 0.665
KIF21A
Kinesin-like protein KIF21A isoform X2; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
     
 0.662
ARCN1
Coatomer subunit delta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.658
Your Current Organism:
Physeter catodon
NCBI taxonomy Id: 9755
Other names: P. catodon, Physeter macrocephalus, sperm whale
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